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MGI marker mapping

Source: R/symbol_map.R
symbol_map.Rd

symbol_map() provides a map of MGI marker symbols into the most recent symbol, which can be the same, and to MGI marker identifiers and names.

Usage

symbol_map()

Value

A tibble with four variables:

  • from: A "from" marker symbol.

  • to: A "to" marker symbol, i.e. the most recent marker symbol. In most cases this coincides with the symbol in from but not always.

  • mrk_id: Marker identifier.

  • mrk_name: Marker name.

Examples

symbol_map()
#> # A tibble: 935,897 × 4
#>    from              to                mrk_id      mrk_name                     
#>    <chr>             <chr>             <chr>       <chr>                        
#>  1 03B03F            03B03F            MGI:1341858 DNA segment, 03B03F (Researc…
#>  2 03B03R            03B03R            MGI:1341869 DNA segment, 03B03R (Researc…
#>  3 03.MMHAP34FRA.seq 03.MMHAP34FRA.seq MGI:1337005 DNA segment, 03.MMHAP34FRA.s…
#>  4 0610005C13Rik     0610005C13Rik     MGI:1918911 RIKEN cDNA 0610005C13 gene   
#>  5 0610006L08Rik     0610006L08Rik     MGI:1923503 RIKEN cDNA 0610006L08 gene   
#>  6 0610008J02Rik     0610008J02Rik     MGI:1925547 RIKEN cDNA 0610008J02 gene   
#>  7 0610009E02Rik     0610009E02Rik     MGI:3698435 RIKEN cDNA 0610009E02 gene   
#>  8 0610009F21Rik     0610009F21Rik     MGI:1918921 RIKEN cDNA 0610009F21 gene   
#>  9 0610009K14Rik     0610009K14Rik     MGI:1918931 RIKEN cDNA 0610009K14 gene   
#> 10 0610009L18Rik     0610009L18Rik     MGI:1914088 RIKEN cDNA 0610009L18 gene   
#> # ℹ 935,887 more rows